With the knowledge of each individual��s HLA alleles and the regions of Gag they responded to, we could determine the HLArestriction of the vast Y-27632 dihydrochloride majority of responses using data from the Los Alamos National Database. Subjects who expressed the HLAB* 57 or B*42 alleles were more likely to restrict their highest magnitude responses through peptides with known B*57 and B*42 epitopes suggesting a strong contribution of these alleles to immunodominance. In addition, such responses made up the great majority of the total Gag-specific response in these individuals . Eight subjects in this cohort expressed at least one HLA-B*42 allele and all eight restricted their immunodominant response through this allele . B*42 restricted responses accounted for an average of 69% of the total observed Gagspecific response in these individuals. Similarly, five subjects expressed at least one HLA- B*57 allele and again, all 5 of these subjects had an immunodominant response restricted through B*57. In these subjects, B*57 restricted responses accounted for, on average, 84% of their total observed Gag-specific response. Several studies have suggested that qualitative characteristics of the HIV-1-specific CD8+ T cell response are associated with viral control and disease progression . Other studies have suggested that immunodominance patterns of HIV-1-specific CD8+ T cell responses are of great importance in establishing control of the virus and HIV-1 disease . We observed no difference in the magnitude or breadth of the Gagspecific CD8+ T cell response between the two groups, as measured by IFN-c production, consistent with other studies . In contrast, there were several differences in the epitope regions of Gag that were targeted by CD8+ T cell responses. In bulk CD8+ T cell populations we observed a significantly higher frequency of na?��ve CD8+ T cells in the NS subjects compared to the SS subjects, but no differences in any other CD8+ T cell subsets. The differentiation INC280 c-Met inhibitor profiles and multifunctional capacity of Gag-specific CD8+ T cells, regardless of immunodominance, were similar between the progression groups. Together, these data suggest that, at least in perinatally infected adolescents, the region of Gag targeted by CD8+ T cells may have more importance to the rate of disease progression than qualitative features such as differentiation and multifunctionality.
This portion of the inhibitor is more flexible than the isoquinoline ring as reflected
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